IL_7WU0_036
3D structure
- PDB id
- 7WU0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of a human pre-40S ribosomal subunit - State RRP12-B3
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- GUGCCAG*CGGUAAUUC
- Length
- 16 nucleotides
- Bulged bases
- 7WU0|1|2|A|628
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7WU0_036 not in the Motif Atlas
- Homologous match to IL_8C3A_425
- Geometric discrepancy: 0.156
- The information below is about IL_8C3A_425
- Detailed Annotation
- Kink-turn related
- Broad Annotation
- No text annotation
- Motif group
- IL_54177.2
- Basepair signature
- cWW-cSW-tWH-L-R-L-R-tHS-cWW
- Number of instances in this motif group
- 5
Unit IDs
7WU0|1|2|G|611
7WU0|1|2|U|612
7WU0|1|2|G|613
7WU0|1|2|C|614
7WU0|1|2|C|615
7WU0|1|2|A|616
7WU0|1|2|G|617
*
7WU0|1|2|C|624
7WU0|1|2|G|625
7WU0|1|2|G|626
7WU0|1|2|U|627
7WU0|1|2|A|628
7WU0|1|2|A|629
7WU0|1|2|U|630
7WU0|1|2|U|631
7WU0|1|2|C|632
Current chains
- Chain 2
- 18S rRNA
Nearby chains
- Chain X
- 40S ribosomal protein S23
- Chain e
- 40S ribosomal protein S30
- Chain f
- Ubiquitin-40S ribosomal protein S27a
- Chain t
- Protein LTV1 homolog
- Chain u
- Pre-rRNA-processing protein TSR1 homolog
- Chain v
- Serine/threonine-protein kinase RIO2
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