IL_7Z20_101
3D structure
- PDB id
- 7Z20 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S E. coli ribosome with an extended uL23 loop from Candidatus marinimicrobia and a stalled filamin domain 5 nascent chain
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.29 Å
Loop
- Sequence
- CUGAG*CGAGAUGAG
- Length
- 14 nucleotides
- Bulged bases
- 7Z20|1|b|G|2779
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7Z20_101 not in the Motif Atlas
- Geometric match to IL_5J7L_345
- Geometric discrepancy: 0.0729
- The information below is about IL_5J7L_345
- Detailed Annotation
- tSH-tHS-tHW
- Broad Annotation
- tSH-tHS-tHW
- Motif group
- IL_04638.3
- Basepair signature
- cWW-tSH-tHW-tHS-cSH-cWW-L
- Number of instances in this motif group
- 5
Unit IDs
7Z20|1|b|C|2635
7Z20|1|b|U|2636
7Z20|1|b|G|2637
7Z20|1|b|A|2638
7Z20|1|b|G|2639
*
7Z20|1|b|C|2773
7Z20|1|b|G|2774
7Z20|1|b|A|2775
7Z20|1|b|G|2776
7Z20|1|b|A|2777
7Z20|1|b|U|2778
7Z20|1|b|G|2779
7Z20|1|b|A|2780
7Z20|1|b|G|2781
Current chains
- Chain b
- 23S rRNA
Nearby chains
- Chain d
- 50S ribosomal protein L3
- Chain j
- 50S ribosomal protein L13
Coloring options: