IL_7Z34_098
3D structure
- PDB id
- 7Z34 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of pre-60S particle bound to DRG1(AFG2)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- CAAU*AGAACG
- Length
- 10 nucleotides
- Bulged bases
- 7Z34|1|1|A|3142, 7Z34|1|1|C|3143
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7Z34_098 not in the Motif Atlas
- Homologous match to IL_8C3A_123
- Geometric discrepancy: 0.2539
- The information below is about IL_8C3A_123
- Detailed Annotation
- Double sheared
- Broad Annotation
- Double sheared
- Motif group
- IL_09705.12
- Basepair signature
- cWW-tSH-tHS-cWW
- Number of instances in this motif group
- 35
Unit IDs
7Z34|1|1|C|3004
7Z34|1|1|A|3005
7Z34|1|1|A|3006
7Z34|1|1|U|3007
*
7Z34|1|1|A|3139
7Z34|1|1|G|3140
7Z34|1|1|A|3141
7Z34|1|1|A|3142
7Z34|1|1|C|3143
7Z34|1|1|G|3144
Current chains
- Chain 1
- 35S pre-ribosomal RNA
Nearby chains
- Chain 3
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain B
- 60S ribosomal protein L3
- Chain O
- 60S ribosomal protein L16-A
Coloring options: