3D structure

PDB id
7Z3O (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation
Experimental method
ELECTRON MICROSCOPY
Resolution
3.3 Å

Loop

Sequence
UGGAAAC*GGAGAUA
Length
14 nucleotides
Bulged bases
7Z3O|1|1|A|1696, 7Z3O|1|1|A|1709
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7Z3O_078 not in the Motif Atlas
Homologous match to IL_5TBW_073
Geometric discrepancy: 0.1341
The information below is about IL_5TBW_073
Detailed Annotation
Kink-turn
Broad Annotation
No text annotation
Motif group
IL_60192.2
Basepair signature
cWW-tSH-tSH-tSS-tHS-L-R-cWW
Number of instances in this motif group
3

Unit IDs

7Z3O|1|1|U|1691
7Z3O|1|1|G|1692
7Z3O|1|1|G|1693
7Z3O|1|1|A|1694
7Z3O|1|1|A|1695
7Z3O|1|1|A|1696
7Z3O|1|1|C|1697
*
7Z3O|1|1|G|1707
7Z3O|1|1|G|1708
7Z3O|1|1|A|1709
7Z3O|1|1|G|1710
7Z3O|1|1|A|1711
7Z3O|1|1|U|1712
7Z3O|1|1|A|1713

Current chains

Chain 1
26S rRNA

Nearby chains

Chain LR
Ribosomal protein L19
Chain LZ
60S ribosomal protein L27
Chain Lc
60S ribosomal protein l30-like protein
Chain Lp
60S ribosomal protein L43-like protein

Coloring options:


Copyright 2025 BGSU RNA group. Page generated in 0.0638 s