3D structure

PDB id
7Z3O (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation
Experimental method
ELECTRON MICROSCOPY
Resolution
3.3 Å

Loop

Sequence
AUAAU*AGAAU
Length
10 nucleotides
Bulged bases
7Z3O|1|1|A|3088
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7Z3O_126 not in the Motif Atlas
Homologous match to IL_5TBW_120
Geometric discrepancy: 0.1496
The information below is about IL_5TBW_120
Detailed Annotation
UAA/GAN
Broad Annotation
No text annotation
Motif group
IL_89002.4
Basepair signature
cWW-tWH-cWW-L-cWW-tHS
Number of instances in this motif group
15

Unit IDs

7Z3O|1|1|A|3061
7Z3O|1|1|U|3062
7Z3O|1|1|A|3063
7Z3O|1|1|A|3064
7Z3O|1|1|U|3065
*
7Z3O|1|1|A|3085
7Z3O|1|1|G|3086
7Z3O|1|1|A|3087
7Z3O|1|1|A|3088
7Z3O|1|1|U|3089

Current chains

Chain 1
26S rRNA

Nearby chains

Chain LH
uL6
Chain LO
60S ribosomal protein L16-like protein
Chain Lm
Putative ribosomal protein

Coloring options:


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