IL_7Z3O_165

3D structure

PDB id

7Z3O (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

CCAAUC*GGAG

Length

10 nucleotides

Bulged bases

7Z3O|1|2|G|456

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7Z3O_165 not in the Motif Atlas

Homologous match to IL_4V88_408

Geometric discrepancy: 0.1397

The information below is about IL_4V88_408

Detailed Annotation

C-loop with extra cWW pair

Broad Annotation

C-loop

Motif group

IL_11347.2

Basepair signature

cWW-cWW-L-cWW-L

Number of instances in this motif group

3

Unit IDs

7Z3O|1|2|C|440
7Z3O|1|2|C|441
7Z3O|1|2|A|442
7Z3O|1|2|A|443
7Z3O|1|2|U|444
7Z3O|1|2|C|445
*
7Z3O|1|2|G|455
7Z3O|1|2|G|456
7Z3O|1|2|A|457
7Z3O|1|2|G|458

Current chains

Chain 2

18S rRNA

Nearby chains

Chain SE

40S ribosomal protein S4

Chain SY

40S ribosomal protein S24