IL_7Z3O_275

3D structure

PDB id

7Z3O (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

CGCUA*UAAAAG

Length

11 nucleotides

Bulged bases

7Z3O|1|2|A|1752

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7Z3O_275 not in the Motif Atlas

Geometric match to IL_8P9A_349

Geometric discrepancy: 0.3807

The information below is about IL_8P9A_349

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_71154.3

Basepair signature

cWW-cWW-cWW-cWW-cWW

Number of instances in this motif group

17

Unit IDs

7Z3O|1|2|C|1640
7Z3O|1|2|G|1641
7Z3O|1|2|C|1642
7Z3O|1|2|U|1643
7Z3O|1|2|A|1644
*
7Z3O|1|2|U|1748
7Z3O|1|2|A|1749
7Z3O|1|2|A|1750
7Z3O|1|2|A|1751
7Z3O|1|2|A|1752
7Z3O|1|2|G|1753

Current chains

Chain 2

18S rRNA

Nearby chains

Chain 1

Large subunit ribosomal RNA; LSU rRNA

Chain Ln

60S ribosomal protein L41-A

Chain SX

40S ribosomal protein s23-like protein