IL_7ZJW_319
3D structure
- PDB id
- 7ZJW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S ribosome as it decodes the Sec-UGA codon
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- AACAA(OMU)G*C(PSU)A(PSU)
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: OMU, PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7ZJW_319 not in the Motif Atlas
- Homologous match to IL_8C3A_080
- Geometric discrepancy: 0.2847
- The information below is about IL_8C3A_080
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_49460.3
- Basepair signature
- cWW-L-R-L-R-L-cWW-L
- Number of instances in this motif group
- 3
Unit IDs
7ZJW|1|L5|A|2675
7ZJW|1|L5|A|2676
7ZJW|1|L5|C|2677
7ZJW|1|L5|A|2678
7ZJW|1|L5|A|2679
7ZJW|1|L5|OMU|2680
7ZJW|1|L5|G|2681
*
7ZJW|1|L5|C|3582
7ZJW|1|L5|PSU|3583
7ZJW|1|L5|A|3584
7ZJW|1|L5|PSU|3585
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain LE
- 60S ribosomal protein L3
- Chain LS
- 60S ribosomal protein uL22
- Chain Lg
- 60S ribosomal protein eL31
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