IL_7ZPQ_134
3D structure
- PDB id
- 7ZPQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the RQT-bound 80S ribosome from S. cerevisiae (C1)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.47 Å
Loop
- Sequence
- GGG*UAAUC
- Length
- 8 nucleotides
- Bulged bases
- 7ZPQ|1|5|G|908, 7ZPQ|1|5|A|920, 7ZPQ|1|5|A|921
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7ZPQ_134 not in the Motif Atlas
- Geometric match to IL_5TBW_033
- Geometric discrepancy: 0.0864
- The information below is about IL_5TBW_033
- Detailed Annotation
- Multiple bulged bases
- Broad Annotation
- No text annotation
- Motif group
- IL_90991.8
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 6
Unit IDs
7ZPQ|1|5|G|907
7ZPQ|1|5|G|908
7ZPQ|1|5|G|909
*
7ZPQ|1|5|U|919
7ZPQ|1|5|A|920
7ZPQ|1|5|A|921
7ZPQ|1|5|U|922
7ZPQ|1|5|C|923
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain BA
- 60S ribosomal protein L2-A
- Chain BM
- 60S ribosomal protein L15-A
- Chain BO
- 60S ribosomal protein L17-A
- Chain Bi
- 60S ribosomal protein L37-A
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