IL_7ZQ6_071
3D structure
- PDB id
- 7ZQ6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S E. coli ribosome with truncated uL23 and uL24 loops and a stalled filamin domain 5 nascent chain
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.75 Å
Loop
- Sequence
- UGCAAAC*GGACGUAUA
- Length
- 16 nucleotides
- Bulged bases
- 7ZQ6|1|b|A|1801, 7ZQ6|1|b|C|1816, 7ZQ6|1|b|U|1820
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7ZQ6_071 not in the Motif Atlas
- Geometric match to IL_5J7L_313
- Geometric discrepancy: 0.0789
- The information below is about IL_5J7L_313
- Detailed Annotation
- Kink-turn related
- Broad Annotation
- No text annotation
- Motif group
- IL_17069.5
- Basepair signature
- cWW-tSH-tHH-cSS-tWW-tHH-tSS-cWW
- Number of instances in this motif group
- 5
Unit IDs
7ZQ6|1|b|U|1798
7ZQ6|1|b|G|1799
7ZQ6|1|b|C|1800
7ZQ6|1|b|A|1801
7ZQ6|1|b|A|1802
7ZQ6|1|b|A|1803
7ZQ6|1|b|C|1804
*
7ZQ6|1|b|G|1813
7ZQ6|1|b|G|1814
7ZQ6|1|b|A|1815
7ZQ6|1|b|C|1816
7ZQ6|1|b|G|1817
7ZQ6|1|b|U|1818
7ZQ6|1|b|A|1819
7ZQ6|1|b|U|1820
7ZQ6|1|b|A|1821
Current chains
- Chain b
- 23S rRNA
Nearby chains
- Chain c
- 50S ribosomal protein L2
Coloring options: