IL_7ZTA_030
3D structure
- PDB id
- 7ZTA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of an Escherichia coli 70S ribosome stalled by Tetracenomycin X during translation of an MAAAPQK(C) peptide
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- G(PSU)GCCAG*CGGUAAUAC
- Length
- 16 nucleotides
- Bulged bases
- 7ZTA|1|16S1|A|532, 7ZTA|1|16S1|U|534
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7ZTA_030 not in the Motif Atlas
- Geometric match to IL_4V88_415
- Geometric discrepancy: 0.2843
- The information below is about IL_4V88_415
- Detailed Annotation
- Kink-turn related
- Broad Annotation
- No text annotation
- Motif group
- IL_54177.1
- Basepair signature
- cWW-cSW-tWH-L-R-L-R-tHS-cWW
- Number of instances in this motif group
- 5
Unit IDs
7ZTA|1|16S1|G|515
7ZTA|1|16S1|PSU|516
7ZTA|1|16S1|G|517
7ZTA|1|16S1|C|518
7ZTA|1|16S1|C|519
7ZTA|1|16S1|A|520
7ZTA|1|16S1|G|521
*
7ZTA|1|16S1|C|528
7ZTA|1|16S1|G|529
7ZTA|1|16S1|G|530
7ZTA|1|16S1|U|531
7ZTA|1|16S1|A|532
7ZTA|1|16S1|A|533
7ZTA|1|16S1|U|534
7ZTA|1|16S1|A|535
7ZTA|1|16S1|C|536
Current chains
- Chain 16S1
- 16S ribosomal RNA
Nearby chains
- Chain ATR1
- Transfer RNA; tRNA
- Chain MRN1
- mRNA
- Chain S031
- 30S ribosomal protein S3
- Chain S041
- 30S ribosomal protein S4
- Chain S121
- 30S ribosomal protein S12
Coloring options: