IL_7ZTA_083

3D structure

PDB id

7ZTA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of an Escherichia coli 70S ribosome stalled by Tetracenomycin X during translation of an MAAAPQK(C) peptide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

CCU*AUG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZTA_083 not in the Motif Atlas

Homologous match to IL_5J7L_257

Geometric discrepancy: 0.0745

The information below is about IL_5J7L_257

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_07785.1

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

33

Unit IDs

7ZTA|1|23S1|C|564
7ZTA|1|23S1|C|565
7ZTA|1|23S1|U|566
*
7ZTA|1|23S1|A|575
7ZTA|1|23S1|U|576
7ZTA|1|23S1|G|577

Current chains

Chain 23S1

23S ribosomal RNA

Nearby chains

Chain L151

50S ribosomal protein L15

Chain L201

50S ribosomal protein L20

Chain L211

50S ribosomal protein L21