IL_7ZTA_157

3D structure

PDB id

7ZTA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of an Escherichia coli 70S ribosome stalled by Tetracenomycin X during translation of an MAAAPQK(C) peptide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

CUUUGAAG*UGGAG

Length

13 nucleotides

Bulged bases

7ZTA|1|23S1|U|2132

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZTA_157 not in the Motif Atlas

Homologous match to IL_3U4M_004

Geometric discrepancy: 0.0447

The information below is about IL_3U4M_004

Detailed Annotation

Kink-turn

Broad Annotation

No text annotation

Motif group

IL_90775.2

Basepair signature

cWW-tSS-tSH-L-tHS-tHS-cWW

Number of instances in this motif group

30

Unit IDs

7ZTA|1|23S1|C|2129
7ZTA|1|23S1|U|2130
7ZTA|1|23S1|U|2131
7ZTA|1|23S1|U|2132
7ZTA|1|23S1|G|2133
7ZTA|1|23S1|A|2134
7ZTA|1|23S1|A|2135
7ZTA|1|23S1|G|2136
*
7ZTA|1|23S1|U|2155
7ZTA|1|23S1|G|2156
7ZTA|1|23S1|G|2157
7ZTA|1|23S1|A|2158
7ZTA|1|23S1|G|2159

Current chains

Chain 23S1

23S ribosomal RNA

Nearby chains