IL_7ZTA_172

3D structure

PDB id

7ZTA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of an Escherichia coli 70S ribosome stalled by Tetracenomycin X during translation of an MAAAPQK(C) peptide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

CUGAG*CGAGAUGAG

Length

14 nucleotides

Bulged bases

7ZTA|1|23S1|G|2780

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZTA_172 not in the Motif Atlas

Homologous match to IL_5J7L_345

Geometric discrepancy: 0.0837

The information below is about IL_5J7L_345

Detailed Annotation

tSH-tHS-tHW

Broad Annotation

tSH-tHS-tHW

Motif group

IL_04638.3

Basepair signature

cWW-tSH-tHW-tHS-cSH-cWW-L

Number of instances in this motif group

5

Unit IDs

7ZTA|1|23S1|C|2636
7ZTA|1|23S1|U|2637
7ZTA|1|23S1|G|2638
7ZTA|1|23S1|A|2639
7ZTA|1|23S1|G|2640
*
7ZTA|1|23S1|C|2774
7ZTA|1|23S1|G|2775
7ZTA|1|23S1|A|2776
7ZTA|1|23S1|G|2777
7ZTA|1|23S1|A|2778
7ZTA|1|23S1|U|2779
7ZTA|1|23S1|G|2780
7ZTA|1|23S1|A|2781
7ZTA|1|23S1|G|2782

Current chains

Chain 23S1

23S ribosomal RNA

Nearby chains

Chain L031

50S ribosomal protein L3

Chain L131

50S ribosomal protein L13