3D structure

PDB id
7ZUW (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of RQT (C1) bound to the stalled ribosome in a disome unit from S. cerevisiae
Experimental method
ELECTRON MICROSCOPY
Resolution
4.3 Å

Loop

Sequence
CGGGG*CAAG
Length
9 nucleotides
Bulged bases
7ZUW|1|2|G|876
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7ZUW_044 not in the Motif Atlas
Geometric match to IL_4V88_431
Geometric discrepancy: 0.1024
The information below is about IL_4V88_431
Detailed Annotation
Tandem non-canonical cWW pairs
Broad Annotation
No text annotation
Motif group
IL_67085.2
Basepair signature
cWW-cWW-cWW-cWW
Number of instances in this motif group
55

Unit IDs

7ZUW|1|2|C|874
7ZUW|1|2|G|875
7ZUW|1|2|G|876
7ZUW|1|2|G|877
7ZUW|1|2|G|878
*
7ZUW|1|2|C|950
7ZUW|1|2|A|951
7ZUW|1|2|A|952
7ZUW|1|2|G|953

Current chains

Chain 2
18S ribosomal RNA

Nearby chains

Chain AB
40S ribosomal protein S1-A
Chain AN
40S ribosomal protein S13
Chain Aa
40S ribosomal protein S26

Coloring options:


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