IL_7ZUW_118
3D structure
- PDB id
- 7ZUW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of RQT (C1) bound to the stalled ribosome in a disome unit from S. cerevisiae
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.3 Å
Loop
- Sequence
- GAAUGUAG*UAUUAUAGC
- Length
- 17 nucleotides
- Bulged bases
- 7ZUW|1|5|U|535, 7ZUW|1|5|U|559
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7ZUW_118 not in the Motif Atlas
- Homologous match to IL_5TBW_020
- Geometric discrepancy: 0.1139
- The information below is about IL_5TBW_020
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_07703.1
- Basepair signature
- cWW-tSH-cSH-tWH-cSH-cHW-cWH-cWW-cWW
- Number of instances in this motif group
- 2
Unit IDs
7ZUW|1|5|G|532
7ZUW|1|5|A|533
7ZUW|1|5|A|534
7ZUW|1|5|U|535
7ZUW|1|5|G|536
7ZUW|1|5|U|537
7ZUW|1|5|A|538
7ZUW|1|5|G|539
*
7ZUW|1|5|U|554
7ZUW|1|5|A|555
7ZUW|1|5|U|556
7ZUW|1|5|U|557
7ZUW|1|5|A|558
7ZUW|1|5|U|559
7ZUW|1|5|A|560
7ZUW|1|5|G|561
7ZUW|1|5|C|562
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain BL
- 60S ribosomal protein L14-A
- Chain BR
- 60S ribosomal protein L20-A
Coloring options: