IL_7ZUW_141

3D structure

PDB id

7ZUW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of RQT (C1) bound to the stalled ribosome in a disome unit from S. cerevisiae

Experimental method

ELECTRON MICROSCOPY

Resolution

4.3 Å

Loop

Sequence

GUUCCG*UGAC

Length

10 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZUW_141 not in the Motif Atlas

Homologous match to IL_5TBW_043

Geometric discrepancy: 0.294

The information below is about IL_5TBW_043

Detailed Annotation

Other IL

Broad Annotation

Other IL

Motif group

IL_71110.1

Basepair signature

cWW-cWW-L-R-cWW

Number of instances in this motif group

10

Unit IDs

7ZUW|1|5|G|1014
7ZUW|1|5|U|1015
7ZUW|1|5|U|1016
7ZUW|1|5|C|1017
7ZUW|1|5|C|1018
7ZUW|1|5|G|1019
*
7ZUW|1|5|U|1035
7ZUW|1|5|G|1036
7ZUW|1|5|A|1037
7ZUW|1|5|C|1038

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain BJ

RPL11B isoform 1