3D structure

PDB id
7ZUW (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of RQT (C1) bound to the stalled ribosome in a disome unit from S. cerevisiae
Experimental method
ELECTRON MICROSCOPY
Resolution
4.3 Å

Loop

Sequence
GUCAAC*GGAC
Length
10 nucleotides
Bulged bases
7ZUW|1|5|G|1515
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7ZUW_159 not in the Motif Atlas
Homologous match to IL_5TBW_062
Geometric discrepancy: 0.1003
The information below is about IL_5TBW_062
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_51005.1
Basepair signature
cWW-L-R-tWH-cWW-L-L
Number of instances in this motif group
2

Unit IDs

7ZUW|1|5|G|1501
7ZUW|1|5|U|1502
7ZUW|1|5|C|1503
7ZUW|1|5|A|1504
7ZUW|1|5|A|1505
7ZUW|1|5|C|1506
*
7ZUW|1|5|G|1514
7ZUW|1|5|G|1515
7ZUW|1|5|A|1516
7ZUW|1|5|C|1517

Current chains

Chain 5
25S ribosomal RNA

Nearby chains

Chain BO
60S ribosomal protein L17-A
Chain BQ
60S ribosomal protein L19-A
Chain Bk
60S ribosomal protein L39

Coloring options:


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