IL_7ZUW_212

3D structure

PDB id

7ZUW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of RQT (C1) bound to the stalled ribosome in a disome unit from S. cerevisiae

Experimental method

ELECTRON MICROSCOPY

Resolution

4.3 Å

Loop

Sequence

CAAU*AGAACG

Length

10 nucleotides

Bulged bases

7ZUW|1|5|A|3143, 7ZUW|1|5|C|3144

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZUW_212 not in the Motif Atlas

Homologous match to IL_8C3A_123

Geometric discrepancy: 0.0952

The information below is about IL_8C3A_123

Detailed Annotation

Double sheared

Broad Annotation

Double sheared

Motif group

IL_09705.12

Basepair signature

cWW-tSH-tHS-cWW

Number of instances in this motif group

35

Unit IDs

7ZUW|1|5|C|3005
7ZUW|1|5|A|3006
7ZUW|1|5|A|3007
7ZUW|1|5|U|3008
*
7ZUW|1|5|A|3140
7ZUW|1|5|G|3141
7ZUW|1|5|A|3142
7ZUW|1|5|A|3143
7ZUW|1|5|C|3144
7ZUW|1|5|G|3145

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain BB

60S ribosomal protein L3

Chain BN

60S ribosomal protein L16-A