IL_8B5L_147

3D structure

PDB id

8B5L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of ribosome-Sec61-TRAP (TRanslocon Associated Protein) translocon complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.86 Å

Loop

Sequence

ACAU(PSU)U*ACCAU

Length

11 nucleotides

Bulged bases

8B5L|1|5|C|4416

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8B5L|1|5|A|4370
8B5L|1|5|C|4371
8B5L|1|5|A|4372
8B5L|1|5|U|4373
8B5L|1|5|PSU|4374
8B5L|1|5|U|4375
*
8B5L|1|5|A|4415
8B5L|1|5|C|4416
8B5L|1|5|C|4417
8B5L|1|5|A|4418
8B5L|1|5|U|4419

Current chains

Chain 5

28S rRNA

Nearby chains

Chain B

Ribosomal protein L3

Chain V

60S ribosomal protein L23

Chain W

Ribosomal protein L24