IL_8CRX_033
3D structure
- PDB id
- 8CRX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cutibacterium acnes 70S ribosome with mRNA, P-site tRNA and Sarecycline bound
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.78 Å
Loop
- Sequence
- UGGAG*CGCAGAUA
- Length
- 13 nucleotides
- Bulged bases
- 8CRX|1|A|A|684
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8CRX_033 not in the Motif Atlas
- Homologous match to IL_5J7L_035
- Geometric discrepancy: 0.1325
- The information below is about IL_5J7L_035
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_01488.3
- Basepair signature
- cWW-tSS-tSH-L-R-tHS-L-cWW
- Number of instances in this motif group
- 10
Unit IDs
8CRX|1|A|U|666
8CRX|1|A|G|667
8CRX|1|A|G|668
8CRX|1|A|A|669
8CRX|1|A|G|670
*
8CRX|1|A|C|681
8CRX|1|A|G|682
8CRX|1|A|C|683
8CRX|1|A|A|684
8CRX|1|A|G|685
8CRX|1|A|A|686
8CRX|1|A|U|687
8CRX|1|A|A|688
Current chains
- Chain A
- RNA (1537-MER)
Nearby chains
- Chain K
- 30S ribosomal protein S11
- Chain a
- Large subunit ribosomal RNA; LSU rRNA
Coloring options: