IL_8CRX_062

3D structure

PDB id

8CRX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cutibacterium acnes 70S ribosome with mRNA, P-site tRNA and Sarecycline bound

Experimental method

ELECTRON MICROSCOPY

Resolution

2.78 Å

Loop

Sequence

UAAC*GGGA

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8CRX_062 not in the Motif Atlas

Geometric match to IL_5TBW_100

Geometric discrepancy: 0.1527

The information below is about IL_5TBW_100

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_67085.2

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

55

Unit IDs

8CRX|1|A|U|1411
8CRX|1|A|A|1412
8CRX|1|A|A|1413
8CRX|1|A|C|1414
*
8CRX|1|A|G|1460
8CRX|1|A|G|1461
8CRX|1|A|G|1462
8CRX|1|A|A|1463

Current chains

Chain A

RNA (1537-MER)

Nearby chains

Chain a

Large subunit ribosomal RNA; LSU rRNA

Chain j

50S ribosomal protein L14