IL_8CRX_105
3D structure
- PDB id
- 8CRX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cutibacterium acnes 70S ribosome with mRNA, P-site tRNA and Sarecycline bound
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.78 Å
Loop
- Sequence
- CUCAGUG*CUUAAG
- Length
- 13 nucleotides
- Bulged bases
- 8CRX|1|a|U|1225, 8CRX|1|a|A|1227
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8CRX_105 not in the Motif Atlas
- Geometric match to IL_5J7L_280
- Geometric discrepancy: 0.085
- The information below is about IL_5J7L_280
- Detailed Annotation
- Kink-turn related
- Broad Annotation
- No text annotation
- Motif group
- IL_57188.5
- Basepair signature
- cWW-tWW-L-tWW-cWW-cSH
- Number of instances in this motif group
- 5
Unit IDs
8CRX|1|a|C|1101
8CRX|1|a|U|1102
8CRX|1|a|C|1103
8CRX|1|a|A|1104
8CRX|1|a|G|1105
8CRX|1|a|U|1106
8CRX|1|a|G|1107
*
8CRX|1|a|C|1223
8CRX|1|a|U|1224
8CRX|1|a|U|1225
8CRX|1|a|A|1226
8CRX|1|a|A|1227
8CRX|1|a|G|1228
Current chains
- Chain a
- 23S ribosomal RNA
Nearby chains
- Chain 3
- 50S ribosomal protein L36
- Chain V
- 50S ribosomal protein bL37
- Chain g
- 50S ribosomal protein L6
- Chain i
- 50S ribosomal protein L13
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