IL_8CRX_120

3D structure

PDB id

8CRX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cutibacterium acnes 70S ribosome with mRNA, P-site tRNA and Sarecycline bound

Experimental method

ELECTRON MICROSCOPY

Resolution

2.78 Å

Loop

Sequence

UGUC*GCGG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8CRX_120 not in the Motif Atlas

Geometric match to IL_5EW4_002

Geometric discrepancy: 0.3426

The information below is about IL_5EW4_002

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_71194.3

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

41

Unit IDs

8CRX|1|a|U|1486
8CRX|1|a|G|1487
8CRX|1|a|U|1488
8CRX|1|a|C|1489
*
8CRX|1|a|G|1773
8CRX|1|a|C|1774
8CRX|1|a|G|1775
8CRX|1|a|G|1776

Current chains

Chain a

23S ribosomal RNA

Nearby chains