IL_8ETI_040
3D structure
- PDB id
- 8ETI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Fkbp39 associated 60S nascent ribosome State 1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- UCUAGACAG*CCGAA
- Length
- 14 nucleotides
- Bulged bases
- 8ETI|1|1|A|1252
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8ETI_040 not in the Motif Atlas
- Homologous match to IL_5TBW_054
- Geometric discrepancy: 0.3534
- The information below is about IL_5TBW_054
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_90538.5
- Basepair signature
- cWW-tSS-tSS-tSH-L-tHS-R-cWW-L-L
- Number of instances in this motif group
- 6
Unit IDs
8ETI|1|1|U|1249
8ETI|1|1|C|1250
8ETI|1|1|U|1251
8ETI|1|1|A|1252
8ETI|1|1|G|1253
8ETI|1|1|A|1254
8ETI|1|1|C|1255
8ETI|1|1|A|1256
8ETI|1|1|G|1257
*
8ETI|1|1|C|1314
8ETI|1|1|C|1315
8ETI|1|1|G|1316
8ETI|1|1|A|1317
8ETI|1|1|A|1318
Current chains
- Chain 1
- RNA (1564-MER)
Nearby chains
- Chain W
- Ribosome assembly factor mrt4
Coloring options: