IL_8ETI_065
3D structure
- PDB id
- 8ETI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Fkbp39 associated 60S nascent ribosome State 1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- GUA*UUAAGC
- Length
- 9 nucleotides
- Bulged bases
- 8ETI|1|1|G|3478
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8ETI_065 not in the Motif Atlas
- Homologous match to IL_5TBW_132
- Geometric discrepancy: 0.2054
- The information below is about IL_5TBW_132
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_84428.1
- Basepair signature
- cWW-cWW-L-cWW-L
- Number of instances in this motif group
- 2
Unit IDs
8ETI|1|1|G|3429
8ETI|1|1|U|3430
8ETI|1|1|A|3431
*
8ETI|1|1|U|3474
8ETI|1|1|U|3475
8ETI|1|1|A|3476
8ETI|1|1|A|3477
8ETI|1|1|G|3478
8ETI|1|1|C|3479
Current chains
- Chain 1
- RNA (1564-MER)
Nearby chains
- Chain B
- 60S ribosomal protein L3-A
- Chain d
- 60S ribosomal protein L31
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