IL_8ETI_070
3D structure
- PDB id
- 8ETI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Fkbp39 associated 60S nascent ribosome State 1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- UG*UGAA
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8ETI_070 not in the Motif Atlas
- Geometric match to IL_4V88_392
- Geometric discrepancy: 0.2504
- The information below is about IL_4V88_392
- Detailed Annotation
- Multiple bulged bases
- Broad Annotation
- No text annotation
- Motif group
- IL_82107.1
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 34
Unit IDs
8ETI|1|6|U|50
8ETI|1|6|G|51
*
8ETI|1|6|U|91
8ETI|1|6|G|92
8ETI|1|6|A|93
8ETI|1|6|A|94
Current chains
- Chain 6
- RNA (125-MER)
Nearby chains
- Chain D
- ATP-dependent RNA helicase has1
- Chain G
- 60S ribosomal protein L8
- Chain K
- Putative ribosome biogenesis protein C8F11.04
- Chain o
- Uncharacterized RNA-binding protein C1827.05c
Coloring options: