IL_8FL3_191

3D structure

PDB id

8FL3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human nuclear pre-60S ribosomal subunit (State I2)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.53 Å

Loop

Sequence

AACAA(OMU)G*C(PSU)A(PSU)

Length

11 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: OMU, PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8FL3_191 not in the Motif Atlas

Homologous match to IL_8C3A_080

Geometric discrepancy: 0.2864

The information below is about IL_8C3A_080

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_49460.3

Basepair signature

cWW-L-R-L-R-L-cWW-L

Number of instances in this motif group

3

Unit IDs

8FL3|1|L3|A|2832
8FL3|1|L3|A|2833
8FL3|1|L3|C|2834
8FL3|1|L3|A|2835
8FL3|1|L3|A|2836
8FL3|1|L3|OMU|2837
8FL3|1|L3|G|2838
*
8FL3|1|L3|C|3850
8FL3|1|L3|PSU|3851
8FL3|1|L3|A|3852
8FL3|1|L3|PSU|3853

Current chains

Chain L3

28S rRNA

Nearby chains

Chain LN

60S ribosomal protein L3

Chain LP

60S ribosomal protein L31

Chain NP

Zinc finger protein 593