IL_8FRU_021
3D structure
- PDB id
- 8FRU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 60S subunit of the Giardia lamblia 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.49 Å
Loop
- Sequence
- GGG*UCAUC
- Length
- 8 nucleotides
- Bulged bases
- 8FRU|1|1|G|623, 8FRU|1|1|C|635, 8FRU|1|1|A|636
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8FRU_021 not in the Motif Atlas
- Geometric match to IL_5TBW_033
- Geometric discrepancy: 0.1097
- The information below is about IL_5TBW_033
- Detailed Annotation
- Multiple bulged bases
- Broad Annotation
- No text annotation
- Motif group
- IL_90991.8
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 6
Unit IDs
8FRU|1|1|G|622
8FRU|1|1|G|623
8FRU|1|1|G|624
*
8FRU|1|1|U|634
8FRU|1|1|C|635
8FRU|1|1|A|636
8FRU|1|1|U|637
8FRU|1|1|C|638
Current chains
- Chain 1
- 28S rRNA
Nearby chains
- Chain A
- 60S ribosomal protein uL2
- Chain N
- 60S ribosomal protein eL15
- Chain P
- 60S ribosomal protein uL22
- Chain j
- 60S ribosomal protein eL37
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