IL_8G2U_148
3D structure
- PDB id
- 8G2U (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Time-resolved cryo-EM study of the 70S recycling by the HflX:control-apo-70S at 900ms
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- UGUAG*CGUAGAGA
- Length
- 13 nucleotides
- Bulged bases
- 8G2U|1|v|A|702
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8G2U_148 not in the Motif Atlas
- Geometric match to IL_7A0S_004
- Geometric discrepancy: 0.3567
- The information below is about IL_7A0S_004
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_94910.1
- Basepair signature
- cWW-tSS-tSH-L-R-R-L-cWW-L
- Number of instances in this motif group
- 3
Unit IDs
8G2U|1|v|U|684
8G2U|1|v|G|685
8G2U|1|v|U|686
8G2U|1|v|A|687
8G2U|1|v|G|688
*
8G2U|1|v|C|699
8G2U|1|v|G|700
8G2U|1|v|U|701
8G2U|1|v|A|702
8G2U|1|v|G|703
8G2U|1|v|A|704
8G2U|1|v|G|705
8G2U|1|v|A|706
Current chains
- Chain v
- 16S rRNA
Nearby chains
- Chain B
- Large subunit ribosomal RNA; LSU rRNA
- Chain j
- 30S ribosomal protein S11
Coloring options: