IL_8G2U_178
3D structure
- PDB id
- 8G2U (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Time-resolved cryo-EM study of the 70S recycling by the HflX:control-apo-70S at 900ms
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- AAGAAG*CCACU
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8G2U_178 not in the Motif Atlas
- Homologous match to IL_5J7L_063
- Geometric discrepancy: 0.1021
- The information below is about IL_5J7L_063
- Detailed Annotation
- Triple sheared related
- Broad Annotation
- Triple sheared
- Motif group
- IL_80231.1
- Basepair signature
- cWW-L-R-L-R-L-R-tHS-cWW
- Number of instances in this motif group
- 2
Unit IDs
8G2U|1|v|A|1430
8G2U|1|v|A|1431
8G2U|1|v|G|1432
8G2U|1|v|A|1433
8G2U|1|v|A|1434
8G2U|1|v|G|1435
*
8G2U|1|v|C|1466
8G2U|1|v|C|1467
8G2U|1|v|A|1468
8G2U|1|v|C|1469
8G2U|1|v|U|1470
Current chains
- Chain v
- 16S rRNA
Nearby chains
- Chain B
- Large subunit ribosomal RNA; LSU rRNA
- Chain K
- 50S ribosomal protein L14
- Chain P
- 50S ribosomal protein L19
- Chain s
- 30S ribosomal protein S20
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