IL_8G61_305
3D structure
- PDB id
- 8G61 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- mRNA decoding in human is kinetically and structurally distinct from bacteria (AC state)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.94 Å
Loop
- Sequence
- AACAA(OMU)G*C(PSU)A(PSU)
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: OMU, PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8G61_305 not in the Motif Atlas
- Homologous match to IL_8C3A_080
- Geometric discrepancy: 0.3015
- The information below is about IL_8C3A_080
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_49460.3
- Basepair signature
- cWW-L-R-L-R-L-cWW-L
- Number of instances in this motif group
- 3
Unit IDs
8G61|1|L5|A|2832
8G61|1|L5|A|2833
8G61|1|L5|C|2834
8G61|1|L5|A|2835
8G61|1|L5|A|2836
8G61|1|L5|OMU|2837
8G61|1|L5|G|2838
*
8G61|1|L5|C|3850
8G61|1|L5|PSU|3851
8G61|1|L5|A|3852
8G61|1|L5|PSU|3853
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain LB
- 60S ribosomal protein L3
- Chain LP
- 60S ribosomal protein L17
- Chain Ld
- 60S ribosomal protein L31
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