IL_8IP8_083
3D structure
- PDB id
- 8IP8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Wheat 80S ribosome stalled on AUG-Stop boron dependently
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- AACAAUG*CUAU
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8IP8_083 not in the Motif Atlas
- Homologous match to IL_8C3A_080
- Geometric discrepancy: 0.072
- The information below is about IL_8C3A_080
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_49460.3
- Basepair signature
- cWW-L-R-L-R-L-cWW-L
- Number of instances in this motif group
- 3
Unit IDs
8IP8|1|RB|A|1879
8IP8|1|RB|A|1880
8IP8|1|RB|C|1881
8IP8|1|RB|A|1882
8IP8|1|RB|A|1883
8IP8|1|RB|U|1884
8IP8|1|RB|G|1885
*
8IP8|1|RB|C|2339
8IP8|1|RB|U|2340
8IP8|1|RB|A|2341
8IP8|1|RB|U|2342
Current chains
- Chain RB
- 60S ribosomal RNA
Nearby chains
- Chain DB
- 60S ribosomal protein uL3
- Chain MA
- 60S ribosomal protein uL22
- Chain SA
- 60S ribosomal protein eL31
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