IL_8IP8_091
3D structure
- PDB id
- 8IP8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Wheat 80S ribosome stalled on AUG-Stop boron dependently
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CGAUGG*UGCUGACG
- Length
- 14 nucleotides
- Bulged bases
- 8IP8|1|RB|U|2153, 8IP8|1|RB|C|2168, 8IP8|1|RB|C|2172
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8IP8_091 not in the Motif Atlas
- Homologous match to IL_8C3A_088
- Geometric discrepancy: 0.0944
- The information below is about IL_8C3A_088
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_64509.1
- Basepair signature
- cWW-tWW-tWW-tSS-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
8IP8|1|RB|C|2150
8IP8|1|RB|G|2151
8IP8|1|RB|A|2152
8IP8|1|RB|U|2153
8IP8|1|RB|G|2154
8IP8|1|RB|G|2155
*
8IP8|1|RB|U|2166
8IP8|1|RB|G|2167
8IP8|1|RB|C|2168
8IP8|1|RB|U|2169
8IP8|1|RB|G|2170
8IP8|1|RB|A|2171
8IP8|1|RB|C|2172
8IP8|1|RB|G|2173
Current chains
- Chain RB
- 60S ribosomal RNA
Nearby chains
- Chain DA
- 60S ribosomal protein uL2
- Chain GB
- 60S ribosomal protein eL43
- Chain aa
- Small subunit ribosomal RNA; SSU rRNA
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