IL_8OI5_209

3D structure

PDB id

8OI5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Candida albicans 80S ribosome in complex with Paromomycin (2mM)

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

UCUUC*GGAAUA

Length

11 nucleotides

Bulged bases

8OI5|1|AS|U|1625, 8OI5|1|AS|U|1811

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8OI5_209 not in the Motif Atlas

Homologous match to IL_8C3A_072

Geometric discrepancy: 0.1474

The information below is about IL_8C3A_072

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_48431.1

Basepair signature

cWW-L-R-L-R-L-cWW

Number of instances in this motif group

2

Unit IDs

8OI5|1|AS|U|1623
8OI5|1|AS|C|1624
8OI5|1|AS|U|1625
8OI5|1|AS|U|1626
8OI5|1|AS|C|1627
*
8OI5|1|AS|G|1807
8OI5|1|AS|G|1808
8OI5|1|AS|A|1809
8OI5|1|AS|A|1810
8OI5|1|AS|U|1811
8OI5|1|AS|A|1812

Current chains

Chain AS

25S

Nearby chains

Chain BU

60S ribosomal protein L27