IL_8OIN_073

3D structure

PDB id

8OIN (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S mammalian mitochondrial ribosome with mtRF1 and P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

UUAAAAG*CCAA

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8OIN_073 not in the Motif Atlas

Geometric match to IL_5TBW_074

Geometric discrepancy: 0.3229

The information below is about IL_5TBW_074

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_49460.3

Basepair signature

cWW-L-R-L-R-L-cWW-L

Number of instances in this motif group

3

Unit IDs

8OIN|1|B8|U|786
8OIN|1|B8|U|787
8OIN|1|B8|A|788
8OIN|1|B8|A|789
8OIN|1|B8|A|790
8OIN|1|B8|A|791
8OIN|1|B8|G|792
*
8OIN|1|B8|C|998
8OIN|1|B8|C|999
8OIN|1|B8|A|1000
8OIN|1|B8|A|1001

Current chains

Chain B8

16S rRNA

Nearby chains

Chain BM

ICT1

Chain BV

bL17m