IL_8OIN_112
3D structure
- PDB id
- 8OIN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 55S mammalian mitochondrial ribosome with mtRF1 and P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GCCAUG*UGAC
- Length
- 10 nucleotides
- Bulged bases
- 8OIN|1|AA|G|207
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8OIN_112 not in the Motif Atlas
- Geometric match to IL_4V88_408
- Geometric discrepancy: 0.2393
- The information below is about IL_4V88_408
- Detailed Annotation
- C-loop with extra cWW pair
- Broad Annotation
- C-loop
- Motif group
- IL_11347.2
- Basepair signature
- cWW-cWW-L-cWW-L
- Number of instances in this motif group
- 3
Unit IDs
8OIN|1|AA|G|190
8OIN|1|AA|C|191
8OIN|1|AA|C|192
8OIN|1|AA|A|193
8OIN|1|AA|U|194
8OIN|1|AA|G|195
*
8OIN|1|AA|U|206
8OIN|1|AA|G|207
8OIN|1|AA|A|208
8OIN|1|AA|C|209
Current chains
- Chain AA
- 12S rRNA
Nearby chains
- Chain AM
- 28S ribosomal protein S16, mitochondrial
- Chain AT
- Mitochondrial ribosomal protein S25
- Chain AU
- Mitochondrial ribosomal protein S26
Coloring options: