IL_8OIR_064
3D structure
- PDB id
- 8OIR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 55S human mitochondrial ribosome with mtRF1 and P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GAG*CC
- Length
- 5 nucleotides
- Bulged bases
- 8OIR|1|B8|A|476
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8OIR_064 not in the Motif Atlas
- Homologous match to IL_5J7L_276
- Geometric discrepancy: 0.1918
- The information below is about IL_5J7L_276
- Detailed Annotation
- Single bulged C
- Broad Annotation
- No text annotation
- Motif group
- IL_61258.15
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 41
Unit IDs
8OIR|1|B8|G|475
8OIR|1|B8|A|476
8OIR|1|B8|G|477
*
8OIR|1|B8|C|584
8OIR|1|B8|C|585
Current chains
- Chain B8
- 16S rRNA
Nearby chains
- Chain BA
- 39S ribosomal protein L22, mitochondrial
- Chain BG
- 39S ribosomal protein L30, mitochondrial
- Chain BY
- 39S ribosomal protein L20, mitochondrial
- Chain BZ
- 39S ribosomal protein L21, mitochondrial
- Chain Ba
- 39S ribosomal protein L52, mitochondrial
- Chain Bs
- 39S ribosomal protein L43, mitochondrial
Coloring options: