IL_8OVE_043
3D structure
- PDB id
- 8OVE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF TRYPANOSOMA BRUCEI PROCYCLIC FORM 80S RIBOSOME : TB11CS6H1 snoRNA mutant
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- AGUUC*GGAU
- Length
- 9 nucleotides
- Bulged bases
- 8OVE|1|AA|U|1149
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8OVE_043 not in the Motif Atlas
- Geometric match to IL_4V88_430
- Geometric discrepancy: 0.1466
- The information below is about IL_4V88_430
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_67085.2
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 55
Unit IDs
8OVE|1|AA|A|1147
8OVE|1|AA|G|1148
8OVE|1|AA|U|1149
8OVE|1|AA|U|1150
8OVE|1|AA|C|1151
*
8OVE|1|AA|G|1230
8OVE|1|AA|G|1231
8OVE|1|AA|A|1232
8OVE|1|AA|U|1233
Current chains
- Chain AA
- SSU rRNA
Nearby chains
- Chain A0
- 40S ribosomal protein S3a
- Chain AG
- 40S ribosomal protein S13, putative
- Chain AW
- 40S ribosomal protein S27, putative
Coloring options: