IL_8OVE_107
3D structure
- PDB id
- 8OVE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF TRYPANOSOMA BRUCEI PROCYCLIC FORM 80S RIBOSOME : TB11CS6H1 snoRNA mutant
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- AGU*AUUU
- Length
- 7 nucleotides
- Bulged bases
- 8OVE|1|BC|U|32
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8OVE_107 not in the Motif Atlas
- Geometric match to IL_5Z1I_002
- Geometric discrepancy: 0.1692
- The information below is about IL_5Z1I_002
- Detailed Annotation
- Decoding loop related
- Broad Annotation
- Decoding loop related
- Motif group
- IL_31737.2
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 11
Unit IDs
8OVE|1|BA|A|399
8OVE|1|BA|G|400
8OVE|1|BA|U|401
*
8OVE|1|BC|A|31
8OVE|1|BC|U|32
8OVE|1|BC|U|33
8OVE|1|BC|U|34
Current chains
- Chain BA
- LUS_alpha rRNA
- Chain BC
- 5.8S rRNA
Nearby chains
- Chain BN
- 60S ribosomal protein L13
- Chain Bk
- 60S ribosomal protein L35, putative
- Chain Bn
- Ribosomal protein L37
- Chain Br
- 60S ribosomal protein L4
Coloring options: