IL_8PKL_032
3D structure
- PDB id
- 8PKL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Escherichia coli paused disome complex (leading 70S non-rotated closed PRE state)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.09 Å
Loop
- Sequence
- CUAAG*CGAAG
- Length
- 10 nucleotides
- Bulged bases
- 8PKL|1|7|A|1156
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8PKL_032 not in the Motif Atlas
- Homologous match to IL_4WF9_036
- Geometric discrepancy: 0.0746
- The information below is about IL_4WF9_036
- Detailed Annotation
- UAA/GAN
- Broad Annotation
- No text annotation
- Motif group
- IL_08938.1
- Basepair signature
- cWW-tWH-L-tHS-cWW
- Number of instances in this motif group
- 22
Unit IDs
8PKL|1|7|C|998
8PKL|1|7|U|999
8PKL|1|7|A|1000
8PKL|1|7|A|1001
8PKL|1|7|G|1002
*
8PKL|1|7|C|1153
8PKL|1|7|G|1154
8PKL|1|7|A|1155
8PKL|1|7|A|1156
8PKL|1|7|G|1157
Current chains
- Chain 7
- 23S ribosomal RNA
Nearby chains
- Chain 3
- 50S ribosomal protein L30
- Chain 8
- 5S ribosomal RNA; 5S rRNA
- Chain t
- 50S ribosomal protein L20
- Chain u
- 50S ribosomal protein L21
Coloring options: