IL_8QYX_014
3D structure
- PDB id
- 8QYX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human 60S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.78 Å
Loop
- Sequence
- UCGUGG*CG
- Length
- 8 nucleotides
- Bulged bases
- 8QYX|1|A2|G|188
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8QYX_014 not in the Motif Atlas
- Geometric match to IL_3IGI_013
- Geometric discrepancy: 0.3041
- The information below is about IL_3IGI_013
- Detailed Annotation
- Multiple bulged bases
- Broad Annotation
- No text annotation
- Motif group
- IL_44609.2
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 24
Unit IDs
8QYX|1|A2|U|184
8QYX|1|A2|C|185
8QYX|1|A2|G|186
8QYX|1|A2|U|187
8QYX|1|A2|G|188
8QYX|1|A2|G|189
*
8QYX|1|A2|C|252
8QYX|1|A2|G|253
Current chains
- Chain A2
- 28S rRNA
Nearby chains
- Chain C2
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain F1
- 60S ribosomal protein L13
- Chain F2
- 60S ribosomal protein L4
- Chain S1
- 60S ribosomal protein L26
- Chain b1
- 60S ribosomal protein L35
- Chain d1
- 60S ribosomal protein L37
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