IL_8R3V_032

3D structure

PDB id

8R3V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (non-rotated disome interface)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.28 Å

Loop

Sequence

CUAAG*CGAAG

Length

10 nucleotides

Bulged bases

8R3V|1|72|A|1156

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8R3V_032 not in the Motif Atlas

Homologous match to IL_4WF9_036

Geometric discrepancy: 0.0718

The information below is about IL_4WF9_036

Detailed Annotation

UAA/GAN

Broad Annotation

No text annotation

Motif group

IL_38507.2

Basepair signature

cWW-tWH-L-tHS-cWW

Number of instances in this motif group

16

Unit IDs

8R3V|1|72|C|998
8R3V|1|72|U|999
8R3V|1|72|A|1000
8R3V|1|72|A|1001
8R3V|1|72|G|1002
*
8R3V|1|72|C|1153
8R3V|1|72|G|1154
8R3V|1|72|A|1155
8R3V|1|72|A|1156
8R3V|1|72|G|1157

Current chains

Chain 72

23S ribosomal RNA

Nearby chains

Chain 32

50S ribosomal protein L30

Chain 82

5S ribosomal RNA; 5S rRNA