IL_8R55_107
3D structure
- PDB id
- 8R55 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Bacillus subtilis MutS2-collided disome complex (stalled 70S)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.57 Å
Loop
- Sequence
- CUAAG*CGAAG
- Length
- 10 nucleotides
- Bulged bases
- 8R55|1|X|A|1202
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8R55_107 not in the Motif Atlas
- Homologous match to IL_4WF9_036
- Geometric discrepancy: 0.1171
- The information below is about IL_4WF9_036
- Detailed Annotation
- UAA/GAN
- Broad Annotation
- No text annotation
- Motif group
- IL_08938.1
- Basepair signature
- cWW-tWH-L-tHS-cWW
- Number of instances in this motif group
- 22
Unit IDs
8R55|1|X|C|1044
8R55|1|X|U|1045
8R55|1|X|A|1046
8R55|1|X|A|1047
8R55|1|X|G|1048
*
8R55|1|X|C|1199
8R55|1|X|G|1200
8R55|1|X|A|1201
8R55|1|X|A|1202
8R55|1|X|G|1203
Current chains
- Chain X
- 23S RNA (2887-MER)
Nearby chains
- Chain Y
- 5S ribosomal RNA; 5S rRNA
- Chain n
- Large ribosomal subunit protein bL20
- Chain o
- Large ribosomal subunit protein bL21
- Chain x
- Large ribosomal subunit protein uL30
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