IL_8RXH_017
3D structure
- PDB id
- 8RXH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : PARENTAL STRAIN
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.93 Å
Loop
- Sequence
- AGU*AUUU
- Length
- 7 nucleotides
- Bulged bases
- 8RXH|1|L7|U|32
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8RXH_017 not in the Motif Atlas
- Geometric match to IL_5TBW_057
- Geometric discrepancy: 0.1449
- The information below is about IL_5TBW_057
- Detailed Annotation
- Isolated cWS basepair
- Broad Annotation
- Isolated cWS basepair
- Motif group
- IL_73554.3
- Basepair signature
- cWW-cWS-cWW
- Number of instances in this motif group
- 10
Unit IDs
8RXH|1|L1|A|369
8RXH|1|L1|G|370
8RXH|1|L1|U|371
*
8RXH|1|L7|A|31
8RXH|1|L7|U|32
8RXH|1|L7|U|33
8RXH|1|L7|U|34
Current chains
- Chain L1
- LSUa_rRNA_chain_1
- Chain L7
- 5.8S_rRNA_chain_7
Nearby chains
- Chain LC
- Putative ribosomal protein L1a
- Chain LI
- Putative 60S ribosomal protein L13
- Chain La
- Putative 60S ribosomal protein L35
- Chain Lj
- Ribosomal protein L37
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