IL_8RXH_073
3D structure
- PDB id
- 8RXH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : PARENTAL STRAIN
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.93 Å
Loop
- Sequence
- AUGUG*CCAUU
- Length
- 10 nucleotides
- Bulged bases
- 8RXH|1|L1|U|1401
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8RXH_073 not in the Motif Atlas
- Homologous match to IL_5TBW_048
- Geometric discrepancy: 0.1971
- The information below is about IL_5TBW_048
- Detailed Annotation
- UAA/GAN
- Broad Annotation
- No text annotation
- Motif group
- IL_89002.4
- Basepair signature
- cWW-tWH-cWW-L-cWW-tHS
- Number of instances in this motif group
- 15
Unit IDs
8RXH|1|L1|A|1224
8RXH|1|L1|U|1225
8RXH|1|L1|G|1226
8RXH|1|L1|U|1227
8RXH|1|L1|G|1228
*
8RXH|1|L1|C|1398
8RXH|1|L1|C|1399
8RXH|1|L1|A|1400
8RXH|1|L1|U|1401
8RXH|1|L1|U|1402
Current chains
- Chain L1
- LSUa_rRNA_chain_1
Nearby chains
- Chain L8
- 5S ribosomal RNA; 5S rRNA
- Chain LP
- 60S ribosomal protein L18
- Chain Lc
- Putative 60S ribosomal protein L7
- Chain Lf
- 60S ribosomal protein L32
- Chain Lg
- Putative ribosomal protein l35a
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