IL_8RXH_314
3D structure
- PDB id
- 8RXH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : PARENTAL STRAIN
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.93 Å
Loop
- Sequence
- UU(PSU)*GAA
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8RXH_314 not in the Motif Atlas
- Geometric match to IL_5F5F_003
- Geometric discrepancy: 0.353
- The information below is about IL_5F5F_003
- Detailed Annotation
- Isolated cWH basepair
- Broad Annotation
- No text annotation
- Motif group
- IL_10892.2
- Basepair signature
- cWW-cHW-cWW
- Number of instances in this motif group
- 58
Unit IDs
8RXH|1|L2|U|1150
8RXH|1|L2|U|1151
8RXH|1|L2|PSU|1152
*
8RXH|1|L2|G|1160
8RXH|1|L2|A|1161
8RXH|1|L2|A|1162
Current chains
- Chain L2
- LSUb_rRNA_chain_2
Nearby chains
- Chain LP
- 60S ribosomal protein L18
- Chain LS
- Putative 60S ribosomal protein L21
- Chain Lb
- 60S ribosomal protein L29
- Chain Lp
- Putative 60S ribosomal protein L44
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