IL_8T3A_198
3D structure
- PDB id
- 8T3A (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Hypomethylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), eEF2, GDP, sordarin, and hibernating factor Los2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.86 Å
Loop
- Sequence
- AUAAGGAUUG*CUUGAUUU
- Length
- 18 nucleotides
- Bulged bases
- 8T3A|1|B5|G|1228
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8T3A|1|B5|A|1224
8T3A|1|B5|U|1225
8T3A|1|B5|A|1226
8T3A|1|B5|A|1227
8T3A|1|B5|G|1228
8T3A|1|B5|G|1229
8T3A|1|B5|A|1230
8T3A|1|B5|U|1231
8T3A|1|B5|U|1232
8T3A|1|B5|G|1233
*
8T3A|1|B5|C|1252
8T3A|1|B5|U|1253
8T3A|1|B5|U|1254
8T3A|1|B5|G|1255
8T3A|1|B5|A|1256
8T3A|1|B5|U|1257
8T3A|1|B5|U|1258
8T3A|1|B5|U|1259
Current chains
- Chain B5
- 18S rRNA
Nearby chains
- Chain BK
- 40S ribosomal protein S10-A
- Chain BM
- 40S ribosomal protein S12
- Chain Bd
- RPS29A isoform 1
- Chain Bf
- Ubiquitin-40S ribosomal protein S31
Coloring options: