IL_8UT0_170
3D structure
- PDB id
- 8UT0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Eukaryotic 80S ribosome with Reh1, eIF5A and A/P site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.22 Å
Loop
- Sequence
- CGAUGG*UGUUGACG
- Length
- 14 nucleotides
- Bulged bases
- 8UT0|1|A|U|2159, 8UT0|1|A|U|2175, 8UT0|1|A|C|2179
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8UT0_170 not in the Motif Atlas
- Homologous match to IL_8C3A_088
- Geometric discrepancy: 0.0904
- The information below is about IL_8C3A_088
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_64509.1
- Basepair signature
- cWW-tWW-tWW-tSS-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
8UT0|1|A|C|2156
8UT0|1|A|G|2157
8UT0|1|A|A|2158
8UT0|1|A|U|2159
8UT0|1|A|G|2160
8UT0|1|A|G|2161
*
8UT0|1|A|U|2173
8UT0|1|A|G|2174
8UT0|1|A|U|2175
8UT0|1|A|U|2176
8UT0|1|A|G|2177
8UT0|1|A|A|2178
8UT0|1|A|C|2179
8UT0|1|A|G|2180
Current chains
- Chain A
- 25S rRNA
Nearby chains
- Chain LD
- 60S ribosomal protein L2-A
- Chain Lr
- 60S ribosomal protein L43-A
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