IL_8UT0_186
3D structure
- PDB id
- 8UT0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Eukaryotic 80S ribosome with Reh1, eIF5A and A/P site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.22 Å
Loop
- Sequence
- UUGA*UACA
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8UT0_186 not in the Motif Atlas
- Homologous match to IL_8P9A_327
- Geometric discrepancy: 0.0978
- The information below is about IL_8P9A_327
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_85033.2
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 35
Unit IDs
8UT0|1|A|U|2718
8UT0|1|A|U|2719
8UT0|1|A|G|2720
8UT0|1|A|A|2721
*
8UT0|1|A|U|2735
8UT0|1|A|A|2736
8UT0|1|A|C|2737
8UT0|1|A|A|2738
Current chains
- Chain A
- 25S rRNA
Nearby chains
- Chain LG
- 60S ribosomal protein L5
- Chain LS
- 60S ribosomal protein L18-A
- Chain LV
- 60S ribosomal protein L21-A
- Chain Ld
- 60S ribosomal protein L29
- Chain Lq
- 60S ribosomal protein L42-A
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